plots output of rleSummaryByReplicateGroup
Usage
rlePlotCompareEffectRemoved(
norm_counts_rle,
removed_effect_rle,
metadata_df,
title
)
Arguments
- norm_counts_rle
output of calculateRLE (maybe one of the sublists in rleByReplicateGroup())
- removed_effect_rle
see norm_counts_rle, but after removing some batch effects
- metadata_df
metadata with at least FASTQFILENAME and LIBRARYDATE
- title
title of the plot
Value
a ggplot with both the norm counts (more transparent) and removedEffect 'counts' on the same plot