calculate RLE of a numeric dataframe
Usage
calculateRLE(counts_df, log2_transformed_flag = FALSE)
Arguments
- counts_df
gene by samples dataframe of raw counts or logged counts (see paramter logged)
- log2_transformed_flag
Default FALSE set to true if log2 transformed counts are passed
Value
rle dataframe with genes x samples. Values are the logged differences from the gene-wise medians